Survival-associated meQTLs across different cancer types


We identified 23,432 meQTLs associated with patient overall survival across different cancer types at FDR < 0.05.


e.g., "BLCA"
e.g., "rs11600543"


Cancer type
SNP ID
SNP position (hg19)
Alleles (A/a)
log-rank test p-value
Sample size
Median survival time AA
Median survival time Aa
Median survival time aa
Dispaly
PRAD rs2646307 chr8:104003778 A/C 0.000176 489 31.13 29.08 16.58 KM Plot
PRAD rs2703747 chr4:185203745 C/G 9.0E-5 479 30.48 31.3 28.37 KM Plot
PRAD rs27694 chr5:96164109 A/T 0.00011 492 23.5 30.78 31.62 KM Plot
PRAD rs2783490 chr1:93627529 C/T 1.07E-8 494 31.3 28.4 9.17 KM Plot
PRAD rs2783493 chr1:93635331 G/A 1.08E-8 493 31.28 28.72 9.17 KM Plot
PRAD rs2783495 chr1:93643677 T/C 1.08E-8 493 31.28 28.72 9.17 KM Plot
PRAD rs2783496 chr1:93644738 G/A 1.08E-8 493 31.28 28.72 9.17 KM Plot
PRAD rs2783497 chr1:93644849 G/A 1.08E-8 493 31.28 28.72 9.17 KM Plot
PRAD rs2783505 chr1:93682090 C/T 1.07E-8 494 31.37 27.47 9.17 KM Plot
PRAD rs2795874 chr10:70375693 C/T 2.68E-5 484 30.78 29.13 29.17 KM Plot
PRAD rs2798235 chr4:3114832 G/A 8.09E-7 492 30.77 31.42 26.72 KM Plot
PRAD rs2815406 chr1:93629673 G/A 1.07E-8 494 31.3 28.4 9.17 KM Plot
PRAD rs2815429 chr1:93590668 A/G 1.02E-8 494 9.17 25.83 31.42 KM Plot
PRAD rs28376010 chr15:68063739 G/T 4.0E-5 479 33.37 27.48 26.37 KM Plot
PRAD rs28399056 chr15:68116010 C/A 9.96E-5 494 33.37 28.22 26.37 KM Plot